SubtiBank SubtiBank
ydgD [2019-06-07 09:00:56]
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ydgD [2019-06-07 09:00:56]

unknown
locus
BSU05590
pI
10.22
mw
12.46 kDa
protein length
114 aa Sequence Blast
gene length
345 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    603,596 603,940

    The protein

    [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|0C2CD998B933D7458DBC4E80A596801274AC43F9|ydgC]-[gene|6DD46B2E342994CB97C13C00AB264B2D62184223|ydgD]-[gene|07A30814F57112196051289AA309AE6DB22CAEFF|ydgE]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-C174 (ydgD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2172 NBRP B. subtilis, Japan]
  • BKE05590 ([gene|6DD46B2E342994CB97C13C00AB264B2D62184223|ydgD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05590 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ACTGACTTTCATCATAATAG, downstream forward: _UP4_TAAGCTTTTCACTAATGTTT
  • BKK05590 ([gene|6DD46B2E342994CB97C13C00AB264B2D62184223|ydgD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05590 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ACTGACTTTCATCATAATAG, downstream forward: _UP4_TAAGCTTTTCACTAATGTTT